SPARSE
latest

Getting Started:

  • Installation guide
  • Toy example of SPARSE
  • Parameter settings

Building Databases:

  • RefSeq database
  • Representatives database
  • Building custom representative databases

Mapping reads:

  • MASH based taxonomic assignment for genomic assemblies or read sets
  • Map metagenomic reads onto representative databases

Interpretations:

  • Outputs
SPARSE
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© Copyright 2017, Zhemin Zhou, Nina Luhmann, Nabil-Fareed Alikhan, Christopher Quince, Mark Achtman Revision 04af778f.

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